Publications 2011

Publications graphic

Publications

  1. Ahmed AH, Wang S, Chuang HH, Oswald RE, "Mechanism of AMPA receptor activation by partial agonists: disulfide trapping of closed lobe conformations," J. Biol Chem 286(40), 35257-66 (2011).
  2. Ando N, Brignole EJ, Zimanyi CM, Funk MA, Yokoyama K, Asturias FJ, Stubbe J, Drennan CL, "Structural interconversions modulate activity of Escherichia coli ribonucleotide reductase," Proc Natl Acad Sci USA, PMCID: PMC3248520 108(52), 21046-51 (2011).
  3. Artz JD, Wernimont AK, Dunford JE, Schapira M, Dong A, Zhao Y, Lew J, Russell RGG, Ebetino FH, Oppermann U, and Hui R, "Molecular characterization of a novel geranylgeranyl pyrophosphate synthase from Plasmodium parasites," J. of Biological Chem 286, 3315-3322 (2011).
  4. Barker M. K., Wilkinson B. L., Faridmoayer A., Scaman C. H., Fairbanks A. J., Rose D. R., "Production and crystallization of processing á-glucosidase I: Pichia pastoris expression and a two-step purification toward structural determination," Protein Expr Purif 79(1), 96-101 (2011).
  5. Bauer WJ, Heath J, Jenkins JL, Kielkopf CL, "Three RNA Recognition Motifs Participate in RNA Recognition and Structural Organization by the Pro-Apoptotic Factor TIA-1," J Mol Biol; PMID 22154808 Epub, (2011).
  6. Baumgardner WJ, Choi JJ, Bian K, Kourkoutis LK, Smilgies DM, Thompson MO, Hanrath T, "Pulsed Laser Annealing of Thin Films of Self-Assembled Nanocrystals," ACS Nano 5(9), 7010-7019 (2011).
  7. Bedewy M, Meshot ER, Reinker MJ, Hart AJ, "Population Groth Dynamics of Carbon Nanotubes," ACS Nano 5(11), 8974-8989 (2011).
  8. Bian K, Choi JJ, Kaushik A, Clancy P, Smilgies DM, Hanrath T, "Shape-Anisotropy Driven Symmetry Transformations in Nanocrystal Superlattice Polymorphs," ACS Nano 5(4), 2815-2823 (2011).
  9. Bilderback DH, Mills DM, "Boris W. Batterman (1930-2010)," J. Synchrotron Radiation 18, 942-943 (2011).
  10. Blose J.M., Pabit S.A., Meisburger S.P., Li L., Jones C.D., Pollack L., "Effects of a Protecting Osmolyte on the Ion Atmosphere Surrounding DNA Duplexes," Biochemistry 50, 8540-8547 (2011).
  11. Braun AR, Sevcsik E, Chin P, Rhoades E, Tristram-Nagle S, Sachs JN, "á-Synuclein Induces Both Positive Mean Curvature and Negative Gaussian Curvature in Membranes," J. Am. Chem. Soc 134(5), 1613-1620 (2011).
  12. Busch P, Rauscher M, Moulin JF and Muller-Buschbaum P, "Debye-Scherrer rings from block copolymer films with powder-like order," Journal of Applied Crystallography 44(2), (2011).
  13. Bush DJ, Kirillova O, Clark SA, Davulcu O, Fabiola F, Xie Q, Somasundaram T, Ellington WR and Chapman MS, "The Structure of Lombricine Kinase: Implications for Phosphagen Kinase Conformational Changes," The Journal of Biological Chemistry 286(11), 9338-9350 (2011).
  14. Byrnes LJ and Sondermann H, "Structural basis for the nucleotide-dependent dimerization of the large G protein atlastin-1/SPG3A," PNAS 108(6), 2216-2221 (2011).
  15. Campolongo MJ, Tan SJ, Smilgies DM, Zhao M, Chen Y, Xhangolli I, Cheng W, Luo D, "Crystalline Gibbs Monolayers of DNA-Capped Nanoparticles at the Air–Liquid Interface," ACS Nano 5(10), 7978-7985 (2011).
  16. Cao Y, Jin X, Huang H, Derebe M, Levin E, Kabaleeswaran V, Pan Y, Punta M, Love J, Weng J, Quick M, Ye S, Kloss B, Bruni R, Martinez-Hackert E, Hendrickson W, Rost B, Javitch J, Rajashankar K, Jiang Y & Zhou M, "Crystal structure of a potassium ion transporter TrkH," Nature 471(7338), 336-340 (2011).
  17. Choi JJ, Bealing CR, Bian K, Hughes KJ, Zhang W, Smilgies DM, Hennig RG, Engstrom J, Hanrath T, "Controlling Nanocrystal Superlattice Symmetry and Shape-Anisotropic Interactions through Variable Ligand Surface Coverage," JACS 133(9), 3131-3138 (2011).
  18. Chu C, Das K, Tyminski JR, Bauman JD, Guan R, Qiu W, Montelione GT, Arnold E, Shatkin AJ, "Structure of the guanylyltransferase domain of human mRNA capping enzyme," Proc Natl Acad Sci USA, PMID: 21636784 108(25), 10104-8 (2011).
  19. Cingolani G, Duncan TM, "Structure of the ATP synthase catalytic complex (F(1)) from Escherichia coli in an autoinhibited conformation," Nat Struct Mol Biol PMCID: PMC3109198 18(6), 701-7 (2011).
  20. Colson JW, Woll AR, Mukherjee A, Levendorf MP, Spitler EL, Shields VB, Spencer MG, Park J, Dichtel WR, "Oriented 2D covalent organic framework thin films on single-layer graphene," Science 332(6026), 228-231 (2011).
  21. Crawley SW, Gharaei MS, Ye Q, Yang Y, Raveh B, London N, Schueler-Furman O, Jia Z and Côté GP, "Autophosphorylation activates Dictyostelium myosin II heavy chain kinase A by providing a ligand for an allosteric binding site in the α-kinase domain," The journal of biological chemistry 286, 2607-2616 (2011).
  22. Cultrera L, Maxson J, Bazarov I, Belomestnykh S, Dobbins J, Dunham B, Karkare S, Kaplan R, Kostroun V, Li Y, Liu X, Lohl F, Smolenski K, Zhao Z, Rice D, Quigley P, Tigner M, Veshcherevich V, Finkelstein K., Dale D., Pichler B., "Photocathode Behavior During High Current Running in the Cornell ERL Photoinjector," Physical Review Special Topics - Accelerators and Beams 14, 12 (2011).
  23. Dale D, Gruner SM, Brock J, Bilderback D, Fontes E, "Science at the Hard X-ray Diffraction Limit (XDL2011), Part 1," Synchrotron Radiation News 24(6), 4-11 (2011).
  24. Das K, Bauman JD, Rim AS, Dharia C, Clark AD Jr., Camarasa MJ, Balzarini J, and Arnold E, "Crystal structure of tert-butyldimethylsilyl-spiroaminooxathioledioxide-thymine (TSAO-T) in complex with HIV-1 reverse transcriptase (RT) redefines the elastic limits of the non-nucleoside inhibitor-binding pocket," J. Med. Chem, PMID: 21446702 54, 2727-2737 (2011).
  25. Desai TV, Kish ER, Woll AR, Engstrom JR, "Hyperthermal Growth of N,NŒ-Ditridecylperylene-3,4,9,10-tetracarboxylic Diimide on Self-Assembled Monolayers: Adsorption Dynamics and Sub- and Multilayer Thin Film Growth," J. Phys. Chem. C 115(37), 18221-18234 (2011).
  26. Desai TV, Hong S, Woll AR, Hughes KJ, Kaushik AP, Clancy P, Engstrom JR, "Hyperthermal Organic Thin Film Growth on Surfaces Terminated with Self-assembled Monolayers. I. The dynamis of trapping," Journal of Chemical Physics 134, 224702 (2011).
  27. Devarakonda S, Gupta K, Chalmer MJ, Hunt JF, Griffin PR, Van Duyne GD Spiegelman BM, "Disorder-to-order transition underlies the structural basis for the assembly of a transcriptionally active PGC-1a/ERRy complex," PNAS PMC3219099 108(46), 18678-83 (2011).
  28. Ding F, Lu C, Zhao W, Rajashankar KR, Anderson DL, Jardine PJ, Grimes S, Ke A, "Structure and assembly of the essential RNA ring component of a viral DNA packaging motor," PNAS, PMCID: PMC3088594 108(18), 7353-62 (2011).
  29. Dong L, Vecchio AJ, Sharma NP, Jurban BJ, Malkowski MG, Smith WL, "Human cyclooxygenase-2 is a sequence homodimer that functions as a conformational heterodimer," J Biol Chem 286(21), 19035-19046 (2011).
  30. Dong M, Si YQ, Sun SY, Pu XP, Yang ZJ, Zhang LR, Zhang LH, Leung FP, Lam CMC, Kwong AKY, Yue J, Zhou Y, Kriksunov IA, Hao Q, and Lee HC, "Design, synthesis and biological characterization of novel inhibitors of CD38," Organic and Biomolecular Chemistry 9(9), 3246-3257 (2011).
  31. Drake EJ, Gulick AM, "Structural Characterization and High-Throughput Screening of Inhibitors of PvdQ, an NTN Hydrolase Involved in Pyoverdine Synthesis," ACS Chem. Biol 6(11), 1277-1286 (2011).
  32. Du J, Zhou Y, Su X, Yu JJ, Khan S, Jiang H, Kim J, Woo J, Kim JH, Choi BH, He B, Chen W, Zhang S, Cerione RA, Auwerx J, Hao Q, Lin H, "Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase," Science PMCID: PMC3217313 334(6057), 806-809 (2011).
  33. Eckenroth BE, Steere AN, Chasteen ND, Everse SJ, Mason AB, "How the binding of human transferrin primes the transferrin receptor potentiating iron release at endosomal pH. PNAS," PNAS 108(32), 13089-13094 (2011).
  34. Englich U, Kriksunov IA, Cerione RA, Cook MJ, Gillilan R, Gruner SM, Huang Q, Kim CU, Miller W, Nielsen S, Schuller D, Smith S and Szebenyi DME, "Microcrystallography, high-pressure cryocooling and BioSAXS at MacCHESS," Journal of Synchrotron Radiation 18(1), 70-73 (2011).
  35. Englich U, Revesz P, Miller W, "A new beamstop for microfocus X-ray capillary beams," Nucl. Instrum Methods Phys Res A 649(1), 101-103 (2011).
  36. Fenwick MK, Philmus B, Begley TP and Ealick SE, "Toxoflavin Lyase Requires a Novel 1-His-2-Carboxylate Facial Triad," Biochemistry 50(6), 1091-1100 (2011).
  37. Ferguson JD, Kim Y, Kourkoutis LF, Vodnick A, Woll AR, Muller DA, Brock, JD, "Epitaxial Oxygen Getter for a Brownmillerite Phase Transformation in Manganite Films," Advanced Materials 23(10), 1226-1230 (2011).
  38. Firer-Sherwood MA, Ando N, Drennan CL and Elliott SJ, "Solution-Based Structural Analysis of the Decaheme Cytochrome, MtrA, by Small-Angle X-ray Scattering and Analytical Ultracentrifugation," J. of Physical Chemistry B 115(38), 11208-11214 (2011).
  39. Fontes E, Bilderback DH and Gruner SM, "Status of CHESS facility and research programs: 2010," Nuclear Instruments and Methods in Physics Research Section A A649, 3-5 (2011).
  40. Fu J, Bouvier M, "Determinants of the endoplasmic reticulum (ER) lumenal-domain of the adenovirus serotype 2 E3-19K protein for association with and ER-retention of major histocompatibility complex class 1 molecules," Mol Immunol 48(4), 532-538 (2011).
  41. Ghosh D, Jiang W, Lo J, Egbuta C, "Higher order organization of human placental aromatase," Steriods, PMCID: PMC3217041 76(8), 753-8 (2011).
  42. Gillilan RE, Bilderback DH, "Single-bounce Monocapillary X-ray Optics: Design and Biological Applications," Synchrotron Radiation and Structural Proteomics, edited by Eugenia Pechkova and Christian Riekel, Chapter 2, (2011).
  43. Gillilan RE, Nielsen SS, Moller M, "X-ray Lab on a Chip: A Microfluidic Mixing System for Small-Angle X-Ray Solution Scattering," Cornell NanoScale Science & Technology Facility Chapter 1940-10, 54 (2011).
  44. Gleghorn ML, Davydova EK, Basu R, Rothman-Denes LB and Murakami KS, "X-ray crystal structures elucidate the nucleotidyl transfer reaction of transcript initiation using two nucleotides," PNAS 108(9), 3566-3571 (2011).
  45. Goodfellow BW, Patel RN, Panthani MG, Smilgies DM, Korgel BA, "Melting and Sintering of a Body-Centered Cubic Superlattice of PbSe Nanocrystals Followed by Small Angle X-ray Scattering," J. Phys. Chem. C 115 (14), 6397-6404 (2011).
  46. Govindasamy L, Agbandje-McKenna M and McKenna R, "X-ray Crystallography of Virus Capsids," Royal Society of Chemistry Chapter 6, (2011).
  47. Gregoire JM, Dale D, van Dover RB, "A wavelet transform algorithm for peak detection and application to powder x-ray diffraction data," Rev Sci Instrum 82(1), 015105 (2011).
  48. Gump JC, Stoltz CA, Mason BP, Freedman BG, Ball JR, Peiris SM, "Equations of state of 2,6-diamino-3,5-dinitropyrazine-1-oxide," J. of Applied Physics 110(7), 073523 (2011).
  49. Gupta A, Jenkins JL, Kielkopf CL, "RNA induces conformational changes in the SF1/U2AF65 splicing factor complex," J Mol Biol 405(5), 1128-1138 (2011).
  50. Ha DH, Moreau LM, Bealing CR, Zhang H, Hennig RG, Robinson RD, "The structural evolution and diffusion during the chemical transformation from cobalt to cobalt phosphide nanoparticles," Journal of Materials Chemistry 21, 11498 (2011).
  51. Hazra AB, Han Y, Chatterjee A, Zhang Y, Lai RY, Ealick SE, Begley TP, "A missing enzyme in thiamin thiazole biosynthesis: identification of TenI as a thiazole tautomerase," J. Am Chem Soc. 133(24), 9311-9 (2011).
  52. Hoffmann KM, Samardzic D, van den Heever K, Rowlett RS, "Co(II)-substituted Haemophilus influenzae B-carbonic anhydrase: spectral evidence for allosteric regulation by pH and bicarbonate ion," Arch. Biochem. Biophys 511, 80-87 (2011).
  53. Hou D, Zhang F, Ji C, Hannon T, Zhu H, Wu J, Ma Y, "Series of phase transitions in cesium azide under high pressure studies by an in situ x-ray diffraction," Phys. Rev. B 84, 064127 (2011).
  54. Hou D, Zhang F, Ji C, Hannon T, Zhu H, Wu J, Levitas VL, Ma Y, "Phase transition and structure of silver azide at high pressure," J. Appl Phys 110, 023524 (2011).
  55. Jenkins JL, Krucinska J, McCarty RM, Bandarian V, Wedekind JE, "Comparison of a PreQ1 Riboswitch Aptamer in Metabolite-bound and Free States with Implications for Gene Regulation," JBC 286, 24626-24637 (2011).
  56. Ji C, Zhang F, Hou D, Zhu H, Wu J, Chyu M-C, Levitas VI, Ma Y, "High pressure X-ray diffraction study of potassium azide," J. Phys. Chem Solids 72(6), 736 (2011).
  57. Jiang F, Ramanathan A, Miller MT, Tang GQ, Gale M, Patel SS, Marcotrigiano, "Sructural basis of RNA recognition and activation by innate immune receptor RIG-I," Nature 479, 423-427 (2011).
  58. Jin H, Yoon M, Ohmi K, Flanagan JW, and Palmer MA, "Electron Cloud Effects in Cornell Electron Storage Ring Test Accelerator and International Linear Collider Damping Ring," Japanese Journal of Applied Physics 50, 026401, 9p (2011).
  59. Kaminska A, Buczko R, Paszkowicz W, Przybylinska H, Werner-Malento E, Suchocki A, Brik M, Durygin A, Drozd V, Saxena S, "Merging of the 4F3/2 level states of Nd3+ ions in the photoluminescence spectra of gadolinium-gallium garnets under high pressure," Phys. Rev. B 84, 075483 (2011).
  60. Kazimirov A, Kohn VG, "High-resolution study of (222, 113) three-beam diffraction in Ge," Acta Crystallogr A 67(pt4), 409-14 (2011).
  61. Kelly ST, Trenkle JC, Koerner LJ, Barron SC, Walker N, Pouliquen PO, Tate MW, Gruner SM, Dufresne ED, Weihsa TP, and Hufnagel TC, "Fast X-ray microdiffraction techniques for studying irreversible transformations in materials," Journal of synchrotron radiation 18(3), 1-11 (2011).
  62. Kim CU, Tate MW, Gruner SM., "Protein dynamical transition at 110K," Proc Natl Acad Sci USA, PMID: 22167801 108 (52), 208997-901 (2011).
  63. Kim CU and Gruner S, "Pressure Cryocooling Protein Crystals," United States Patent # US 8,030,449 B2 October 4, 2011, (2011).
  64. Klein BJ, Bose D, Baker KJ, Yusoff ZM, Zhang X and Murakami KS, "RNA polymerase and transcription elongation factor Spt4/5 complex structure," Proceedings of the National Academy of Sciences of the United States of America 108(2), 546-550 (2011).
  65. Kmetko J, Warkentin M, Englich U, Thorne RE, "Can radiation damage to protein crystals be reduced using small-molecule compounds?," Acta Cryst. D67, 881-893 (2011).
  66. Koerner LJ and Gruner SM, "X-ray analog pixel array detector for single synchrotron bunch time-resolved imaging," Journal of Synchrotron Radiation, PMCID: PMC: 3042326 18, 157-164 (2011).
  67. Koerner LJ, Gillilan RE, Green KS, Wang S and Gruner SM, "Small-angle solution scattering using the mixed-mode pixel array detector," Journal of Synchrotron Radiation 18, 148-156 (2011).
  68. Kozlov G, Denisov AY, Girard M, Dicaire MJ, Hamlin J, McPherson PW, Brais B, Gehring K, "Structural Basis of Defects in the Sacsin HEPN Domain Responsible for Autosomal Recessive Spastic Ataxia of Charlevoix-Saguenay (ARSACS)," J. of Biological Chem. 286, 20407-20412 (2011).
  69. Kucerca N, Holland BW, Gray CG, Tomberli B, Katsaras J, "The Scattering Density Profile Model of POPG Bilayers as Determined by Molecular Dynamics Simulations, and Small-Angle Neutron and X-Ray Scattering Experiments," Phys Chemistry B epub, (2011).
  70. Kucerka N, Nieh M.P., Katsaras J., "Fluid phase lipid areas and bilayer thicknesses of commonly used phosphatidylcholines as a function of temperature," Biochimica et Biophysica acta (BBA) - Biomembranes 1808(11), 2761-2771 (2011).
  71. Lancaster KM, Finkelstein KD, DeBeer S, "KB X-ray Emission Spectroscopy Offers Unique Chemical Bonding Insights: Revisiting the Electronic Structure of Ferrocene," Inorg. Chem 50(14), 6767-6774 (2011).
  72. Lee JCT, Yuan S, Lal S, Joe YI, Gan Y, Smadici S, Finkelstein K, Feng Y, Rusydi A, Goldbart PM, Cooper SL, Abbamonte P, "Two-stage orbital order and dynamical spin frustration in KCuF3," Nature Physics 2117, (2011).
  73. Li J, Srivastava S, Ok JG, Zhang Y, Bedewy M, Kotov NA, Hart AJ, "The Scattering Density Profile Model of POPG Bilayers as Determined by Molecular Dynamics Simulations, and Small-Angle Neutron and X-Ray Scattering Experiments," Chem. Mater. 23, 1023-1031 (2011).
  74. Li JJ, Srivastava S, Ok JG, Zhang YY, Bedewy M, Kotov NA, Hart AJ, "Multidirectional Hierarchical Nanocomposites Made by Carbon Nanotube Growth within Layer-by-Layer Assembled Films," Chemistry of Materials 23(4), 1023-1031 (2011).
  75. Li L, Pabit SA, Meisburger SP, and Pollack L, "Double-Stranded RNA Resists Condensation," Physical Review Letters 106 (10), 108101, 4p (2011).
  76. Li R, Cornaby S, Kamperman M, Smilgies DM, "Nanocomposite characterization on multiple length scales using µSAXS," J. Synchrotron Radiation 18(5), 697-701 (2011).
  77. Liberman JA, Wedekind JE, "Base ionization and ligand binding: how small ribozymes and riboswitches gain a foothold in a protein world," Curr. Opin. Struct. Biol., PMCID: PMC3112304 21, 327-34 (2011).
  78. Liberman JA, Wedekind JE, "Riboswitch structure in the ligand-free state. Wiley Interdiscip Rev RNA," Wiley Interdiscip Rev RNA., PMCID: PMC3252462 Sep 28. doi: 10.1002/wrna.114., (2011).
  79. Limburg KE, Olson C, Walther Y, Dale D, Slomp CP and Hoie H, "Tracking Baltic hypoxia and cod migration over millennia with natural tags," PNAS 108(22), E177-E182 (2011).
  80. Luthra A, Zhu G, Desrosiers DC, Eggers CH, Mulay V, Anand A, McArthur FA, Romano FB, Caimano MJ, Heuck AP, Malkowski MG, Radolf JD, "The transition from closed to open conformation of Treponema pallidum outer membrane-associated lipoprotein TP0453 involves membrane sensing and integration by two amphipathic helices," J. Biol Chem 286(48), 41656-68 (2011).
  81. McGlashon A, Zhang W, Smilgies DM, Shkunov M, Genevicius K, Whitehead KS, Amassian A, Malliaras GG, Bradley DDC, Heeney M, Campbell AJ, "Spectroscopic and morphological investigation of conjugated photopolymerisable quinquethiophene liquid crystals," Current Applied Physics doi: 10.1016/j.cap.2011.07.042 12, e59-e66 (2011).
  82. Miura A, Lowe M, Leonard BM, Subban CV, Masubuchi Y, Kikkawa S, Dronskowski R, Hennig RG, Abruna HD and DiSalvo FJ, "Silver delafossite nitride, AgTaN2," Journal of Solid State Chemistry 184(1), 7-11 (2011).
  83. Nageswara Rao J, Rivera-Santiago R, Li XE, Lehman W, Dominguez R, "Structural analysis of smooth muscle tropomyosin alpha and beta isoforms," J. Biol Chem, PMID: 22119916 epub, (2011).
  84. Nam HJ, Gurda BL, McKenna R, Potter M, Byrne B, Salganik M, Muzyczka N, Agbandje-McKenna M, "Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking," J. Virol 85(22), 11791-9 (2011).
  85. Nam KH, Kurinov I, Ke A, "Crystal structure of clustered regularly interspaced short palindromic repeats (CRISPR)-associated Csn2 protein revealed Ca2+-dependent double-stranded DNA binding activity," J Biol Chem, PMCID: PMC3162437 286(34), 30759-68 (2011).
  86. Namgoong S, Boczkowska M, Glista MJ, Winkelman JD, Rebowski G, Kovar DR, Dominguez R, "Mechanism of actin filament nucleation by Vibrio VopL and implications for tandem W domain nucleation," Nat Struct Mol Biol, PMCID: PMC 3173040 18(9), 1060-7 (2011).
  87. Navarro MVAS, Newell PD, Krasteva PV, Chatterjee D, Madden DR, OToole GA and Sondermann H, "Structural Basis for c-di-GMP-Mediated Inside-Out Signaling Controlling Periplasmic Proteolysis," PLoS Biology 9(2), e1000588 (2011).
  88. Neuhold A, Fladischer S, Mitsche S, Flesch HG, Moser A, Novak J, Smilgies DM, Kraker E, Lamprecht B, Haase A, Grogger W, Resel R, "Structure and Morphology of an organic/inorganic multilayer stack: An x-ray reflectivity study," J. Appl. Phys. 110 (11), DOI:10.1063/1.366171 (2011).
  89. O'Malley SM, Revesz P, Kazimirov A, Sirenko AA, "Time-resolved X-ray Excited Optical Luminescence in InGaN/GaN Multiple Quantum Well Structures," J. of Applied Physics 109, 124906 (2011).
  90. Olia AS, Prevelige PE Jr., Johnson JE, Cingolani G, "Three-dimensional structure of a viral genome-delivery portal vertex," Nat Struct. Mol Biol, PMCID: PMC3087855 18(5), 597-603 (2011).
  91. Park M, Lee N, Choi SH, An K, Yu SH, Kim JH, Kwon SH, Kim D, Kim H, Baek SI, Ahn TY, Park OK, Son JS, Sung YE, Kim YW, Wang Z, Pinna N, Hyeon T, "Large-Scale Synthesis of Ultrathin Manganese Oxide Nanoplates and Their Applications to T1 MRI Contrast Agents," Chem. Mater. 23(14), 3318-3324 (2011).
  92. Park S, Crane BR, "Crystallization and preliminary X-ray crystallographic analysis of CheW from Thermotoga maritima: a coupling protein of CheA and the chemotaxis receptor," ACta Crystallographica Section F 67(4), 504-6 (2011).
  93. Park SY, Ham SW, Kim KY, Crane BR, "Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli CheA P3 dimerization domain," Acta Cryst. F 67(pt 6), 662-4 (2011).
  94. Park M, Kim H, Younglood JP, Han SW, Verplogen E, Hart AJ, "Excellent dispersion of MWCNTs in PEO polymer achieved through a simple and potentially cost-effective evaporation casting," Nanotechnology 22(41), 415703 (2011).
  95. Paul K, Gonzalez-Bonet G, Bilwes AM, Crane BR, Blair D, "Architecture of the Flagellar Rotor," EMBO J 30, 2962-2971 (2011).
  96. Pearson CL, Dale D, Lombardo K, "An investigation of fire scars in Pseudotsuga macrocarpa by Scanning X-Ray Fluorescence Microscopy," Forest Ecology and Management 262(7), 1258-1264 (2011).
  97. Perez-Rodriguez R, Haitjema C, Huang Q, Nam KH, Bernardis S, Ke A, DeLisa MP., "Envelope stress is a trigger of CRISPR RNA-mediated DNA silencing in Escherichia coli," Mol Microbiol 79(3), 584-99 (2011).
  98. Philipp HT, Hromalik M, Tate M, Koerner L, Gruner SM, "Pixel array detector for X-ray free electron laser experiments," Nuclr Instruments and Methods A 649(1), 67-69 (2011).
  99. Pocanschi CL, Kozlov G, Brockmeier U, Brockmeier A, Williams DB, Gehring K, "Structural and functional relationships between the lectin and arm domains of calreticulin," JBC 286(31), 27266-77 (2011).
  100. Pollack L, "Effects of a Protecting Osmolyte on the Ion Atmosphere Surrounding DNA Duplexes," Biochemistry including biophysical chemistry & molecular biology (2011).
  101. Poon K, Ahmed AH, Nowak LM, Oswald RE, "Mechanisms of Modal Activation of GluA3 Receptors," Mol Pharmacol, PMID 21464198 80(1), 49-59 (2011).
  102. Quan Z, Wang Y, Bae IT, Loc WS, Wang C, Wang Z, Fang J, "Reversal of Hall–Petch Effect in Structural Stability of PbTe Nanocrystals and Associated Variation of Phase Transformation," Nano Lett. 11(12), 5531-5536 (2011).
  103. Ramachandran S, Cerione RA, "A dominant-negative Galpha mutant that traps a stable rhodopsin-Galpha-GTP-betagamma complex," Journal of Biological Chemistry PMCID: PMC3069470 286(14), 12702-12711 (2011).
  104. Revesz P, Temnykh AB, Pauling AK, "New X-ray beam position monitors with submicron resolution utilizing imaging of scattered X-rays at CHESS," Nuclear Instruments & Methods in Physics Research Section a-Accelerators Spectrometers Detectors and Associated Equipment 649(1), 94-96 (2011).
  105. Roy A, Bhardwaj A and Cingolani G, "Crystallization of the nonameric small terminase subunit of bacteriophage P22," Acta Crystallographica Section F 67(1), 104-110 (2011).
  106. Schuller DJ, Reisch CR, Moran MA, Whitman WB, Lanzilotta WN. , "Structures of dimethylsulfionopropionate-dependent demethylase from the marine organism Pelagabacter ubique.," Protein Sci, Advance online publication 12/7/11, PMID: 22162093 doi: 10.1002/pro.2015, (2011).
  107. Schuren J, Miller MP, "Quantifying the uncertainty of synchrotron-based lattice strain measurements," The Journal of Strain Analysis for Engineering Design 46(7), 663-681 (2011).
  108. Sepe A, Hoppe ET, Jaksch S, Magerl D, Zhong Q, Perlich J, Posselt D, Smilgies DM, Papadakis CM, "The effect of heat treatment on the internal structure of nanostructured block copolymer films," J. of Physics: Condensed Matter 23(25), 254213 (2011).
  109. Shui B, Wang Q, Lee F, Byrnes LJ, Chudakov DM, Lukyanov SA, Sondermann H, "Circular permutation of red fluorescent proteins," PLoS One 6(5), e20505 (2011).
  110. Simon KA, Shetye GS, Englich U, Wu L, Luk YY, "Noncovalent polymerization of mesogens crystallizes lysozyme: correlation between nonamphiphilic lyotropic liquid crystal phase and protein crystal formation," Langmuir 27(17), 10901-6 (2011).
  111. Sippel KH, Venkatakrishnan B, Boehlein SK, Sankaran B, Quirit JG, Govindasamy L, Agbandje-McKenna M, Goodison S, Rosser CJ, McKenna R, "Insights into Mycoplasma genitalium metabolism revealed by the structure of MG289, an extracytoplasmic thiamine binding lipoprotein," Proteins 79(2), 528-536 (2011).
  112. Soliman AS, Warkentin M, Apker B, Thorne RE, "Development of high-performance X-ray transparent crystallization plates for in situ protein crystal screening and analysis," Acta Cryst. D 67(Pt 7), 646-56 (2011).
  113. Spitler EL, Koo BT, Novotney JL, Colson JW, Uribe-Romo FJ, Gutierrez GD, Clancy P, Dichtel WR, "A 2D Covalent Organic Framework with 4.7-nm Pores and Insight into Its Interlayer Stacking," JACS 133(48), 19416-19421 (2011).
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Ph.D. Theses

  1. Boslett A, "Hedonic analyses of urban green spaces and urban tree cover in Syracuse, NY," Ph.D. Thesis, SUNY College of Environmental Science and Forestry, Advisors: Karin E. Limburg and Colin M. Beier, (2011).
  2. Campbell K, "Alignment strategies for fullerenes and their dimers using soft matter," Ph.D. Thesis, Georgia Institute of Technology, Advisor: David Bucknall, (2011).
  3. Chandler C, "Phase behavior of block copolymers in compressed carbon dioxide and as single domain-layer, nanolithographic etch resists for sub-10 nm pattern transfer," Ph.D. Thesis, University of Massachusetts Amherst, Advisor: James J. Watkins,(2011).
  4. Fang F, "Band alignment measurements at heterojunction interfaces in layered thin film solar cells & thermoelectrics," Ph.D. Thesis, University of Delaware, Advisor: Robert L. Opila, (2011).
  5. Hou D, "High pressure study of green energy generating materials," Ph.D. Thesis, Texas Tech University, Advisor: Yanzhang Ma, (2011).
  6. Hughes KJ, "The initial stages of atomic layer deposition on substrates modified by organic thin films," Ph.D. Thesis, Cornell University, Advisor: James Engstrom, (2011).
  7. Kim EK, "New Nanoporous Carbon Materials from Block Copolymer Precursors for Supercapacitor Applications," Ph.D. Thesis, Carnegie Mellon University, Advisor: Tomasz Kowalewski, (2011).
  8. Krasteva PV, "Identification and structure-function analyses of bacterial c-di-GMP receptors," Ph.D. Thesis, Cornell University, Advisor: Holger Sondermann, (2011).
  9. Kung Y, "Structural Studies of Metalloenzyme Complexes in Acetogenic Carbon Fixation," Ph.D. Thesis, Massachusetts Institute of Technology, Advisor: Catherine L. Drennan, (2011).
  10. Li L, "Understanding the mechanism of ion-mediated inter-DNA and inter-RNA interactions," Ph.D. Thesis, Cornell University, Advisor: Lois Pollack, (2011).
  11. McCluskey P, "Thermal Sensor Arrays for The Combinatorial Analysis of Thin Films," Ph.D. Thesis, Harvard University, Advisor: Joost J. Vlassak, (2011).
  12. Perlmutter JD, "Molecular Dynamics Simulations of Membranes and Membrane Proteins," Ph.D. Thesis, University of Minnesota, Advisor: Jonathan Sachs, (2011).
  13. Silverstein T, "Structural Studies of Y-family DNA Polymerases Eta and Kappa: Replication Through Ultraviolet-Induced and Oxidative DNA Damage," Ph.D. Thesis, Mount Sinai School of Medicine of New York University, Advisor: Aneel K. Aggarwal, (2011).
  14. Son JS, "Synthesis and characterization of Cadmium selenide nanosheets and Bismuth nanocrystals," Ph.D. Thesis, Seoul National University, Advisor: Taeghwan Hyeon, (2011).
  15. Suteewong T, "Synthesis, characterization and structure control of ordered mesoporous silica nanoparticles," Ph.D. Thesis, Cornell University, Advisor: Ulrich Weisner, (2011).
  16. Tague ME, "A combinatorial approach for exploring fuel cell electrocatalysts," Ph.D. Thesis, Cornell University, Advisor: Hector Abruna, (2011).

Videos

  1. CornellUniveristy, "Staff Notes: CHESS with Arthur Woll," YouTube, Web. 1 Mar. 2011.